Dr. An-Ping Hsia
(夏安平)

Consigliere/Assistant Scientist III

EDUCATION:

  • BVM, Veterinary Medicine, National Taiwan University, Taiwan, 1989
  • Ph.D., Interdepartmental Genetics, Iowa State University, 1995

EXPERIENCE:

  • Post-Doctoral Research Associate, Academia Sinica, 1995-1996
  • Lab Manager, Schnable Lab, 1996-2004
  • Consigliere/Assistant Scientist III, Schnable Lab, 2004-Present

E-mail:

PUBLICATIONS (13):

* Authors contributed equally to the article
  • Liu S, AP Hsia, PS Schnable (2013) Digestion-ligation-amplification (DLA): a simple genome walking method to amplify unknown sequences flanking mutator (Mu) transposons and thereby facilitate gene cloning. Methods Mol Biol: 167-176.
    [ Abstract | Full Text PDF | doi:10.1007/978-1-62703-568-2_12 | PMID: 23918428 ]
  • The International Brachypodium Initiative: Principal investigators: JP Vogel, DF Garvin, TC Mockler, J Schmutz, D Rokhsar, MW Bevan ; DNA sequencing and assembly: K Barry, S Lucas, M Harmon-Smith, K Lail, H Tice, J Schmutz, J Grimwood, N McKenzie, MW Bevan ; Pseudomolecule assembly and BAC end sequencing: N Huo, YQ Gu, GR Lazo, OD Anderson, JP Vogel, FM You, MC Luo, J Dvorak, J Wright, M Febrer, MW Bevan, D Idziak, R Hasterok, DF Garvin ; Transcriptome sequencing and analysis: E Lindquist, M Wang, SE Fox, HD Priest, SA Filichkin, SA Givan, DW Bryant, JH Chang, TC Mockler, H Wu, W Wu, AP Hsia, PS Schnable, A Kalyanaraman, WB Barbazuk, TP Michael, SP Hazen, JN Bragg, D Laudencia-Chingcuanco, JP Vogel, DF Garvin, Y Weng, N McKenzie, MW Bevan ; Gene analysis and annotation: G Haberer, M Spannagl, K Mayer, T Rattei, T Mitros, D Rokhsar, SJ Lee, JK Rose, LA Mueller, TL York ; Repeats analysis: T Wicker, JP Buchmann, J Tanskanen, AH Schulman, H Gundlach, J Wright, MW Bevan, A Costa de Oliveira, L da C. Maia, W Belknap, YQ Gu, N Jiang, J Lai, L Zhu, J Ma, C Sun, E Pritham ; Comparative genomics: J Salse, F Murat, M Abrouk, G Haberer, M Spannagl, K Mayer, R Bruggmann, J Messing, FM You, MC Luo, J Dvorak ; Small RNA analysis: N Fahlgren, SE Fox, CM Sullivan, TC Mockler, JC Carrington, EJ Chapman, GD May, J Zhai, M Ganssmann, S Gurazada, M German, BC Meyers, PJ Green ; Manual annotation and gene family analysis: JN Bragg, L Tyler, J Wu, YQ Gu, GR Lazo, D Laudencia-Chingcuanco, J Thomson, JP Vogel, SP Hazen, S Chen, HV Scheller, J Harholt, P Ulvskov, SE Fox, SA Filichkin, N Fahlgren, JA Kimbrel, JH Chang, CM Sullivan, EJ Chapman, JC Carrington, TC Mockler, LE Bartley, P Cao, KH Jung, MK Sharma, M Vega-Sanchez, P Ronald, CD Dardick, S Bodt, W Verelst, D Inze, M Heese, A Schnittger, X Yang, UC Kalluri, GA Tuskan, Z Hua, RD Vierstra, DF Garvin, Y Cui, S Ouyang, Q Sun, Z Liu, A Yilmaz, E Grotewold, R Sibout, K Hematy, G Mouille, H Höfte, TP Michael, J Pelloux, D O'Connor, JC Schnable, S Rowe, F Harmon, CL Cass, JC Sedbrook, ME Byrne, S Walsh, J Higgins, MW Bevan, P Li, TP Brutnell, T Unver, H Budak, H Belcram, M Charles, B Chalhoub, I Baxter « show all participants » (2010) Genome sequencing and analysis of the model grass Brachypodium distachyon. Nature: 763-768.
  • Schnable PS*, D Ware*, RS Fulton, JC Stein, F Wei, S Pasternak, C Liang, J Zhang, LA Fulton, TA Graves, P Minx, AD Reily, L Courtney, SS Kruchowski, C Tomlinson, C Strong, K Delehaunty, C Fronick, W Courtney, SM Rock, E Belter, F Du, K Kim, RM Abbott, M Cotton, A Levy, P Marchetto, K Ochoa, SM Jackson, B Gillam, W Chen, L Yan, J Higginbotham, M Cardenas, J Waligorski, E Applebaum, L Phelps, J Falcone, K Kanchi, T Thane, A Scimone, N Thane, J Henke, T Wang, J Ruppert, N Shah, K Rotter, J Hodges, E Ingenthron, M Cordes, S Kohlberg, J Sgro, B Delgado, K Mead, A Chinwalla, S Leonard, K Crouse, K Collura, D Kudrna, J Currie, R He, A Angelova, S Rajasekar, T Mueller, R Lomeli, G Scara, A Ko, K Delaney, M Wissotski, G Lopez, D Campos, M Braidotti, E Ashley, W Golser, H Kim, S Lee, J Lin, Z Dujmic, W Kim, J Talag, A Zuccolo, C Fan, A Sebastian, M Kramer, L Spiegel, L Nascimento, T Zutavern, B Miller, C Ambroise, S Muller, W Spooner, A Narechania, L Ren, S Wei, S Kumari, BP Faga, MJ Levy, L McMahan, P Van Buren, MW Vaughn, K Ying, CT Yeh, SJ Emrich, Y Jia, A Kalyanaraman, AP Hsia, WB Barbazuk, RS Baucom, TP Brutnell, NC Carpita, C Chaparro, JM Chia, JM Deragon, JC Estill, Y Fu, JA Jeddeloh, Y Han, H Lee, P Li, DR Lisch, S Liu, Z Liu, DH Nagel, MC McCann, P San Miguel, AM Myers, D Nettleton, J Nguyen, BW Penning, L Ponnala, KL Schneider, DC Schwartz, A Sharma, C Soderlund, NM Springer, Q Sun, H Wang, M Waterman, R Westerman, TK Wolfgruber, L Yang, Y Yu, L Zhang, S Zhou, Q Zhu, JL Bennetzen, RK Dawe, J Jiang, N Jiang, GG Presting, SR Wessler, S Aluru, RA Martienssen, SW Clifton, WR McCombie, RA Wing, RK Wilson « view remaining 107 author(s) » (2009) The B73 maize genome: complexity, diversity, and dynamics. Science: 1112-1115.(Cover image; a commentary on this manuscript solicited by journal editors and written by C. Feuillet and K. Eversole was provided in 326: 1071-1072; cited in Wikipedia: http://en.wikipedia.org/wiki/Maize; selected as an Editors' Choice by MaizeGDB, 12/09; selected as a "must read" by the Faculty of 1000 Biology)
  • Jung KH, CD Dardick, LE Bartley, P Cao, J Phetsom, P Canlas, YS Seo, M Shultz, S Ouyang, Q Yuan, BC Frank, E Ly, L Zheng, Y Jia, AP Hsia, K An, HH Chou, DM Rocke, GC Lee, PS Schnable, G An, CR Buell, PC Ronald (2008) Refinement of light-responsive transcript lists using rice oligonucleotide arrays: evaluation of gene-redundancy. PLoS One: e3337.
    [ Abstract | Full Text PDF | Supplemental Materials | doi:10.1371/journal.pone.0003337 | PMID: 18836531 | Cited 100 times ]
  • Li J, AP Hsia, PS Schnable (2007) Recent advances in plant recombination. Curr Opin Plant Biol: 131-135.(Epub: 8 Feb 2007)
    [ Abstract | Full Text PDF | doi:10.1016/j.pbi.2007.01.007 | PMID: 17291826 ]
  • Hsia AP, TJ Wen, HD Chen, Z Liu, MD Yandeau-Nelson, Y Wei, L Guo, PS Schnable (2005) Temperature gradient capillary electrophoresis (TGCE)--A tool for the high-throughput discovery and mapping of SNPs and IDPs. Theor Appl Genet: 218-225.
    [ Abstract | Full Text PDF | doi:10.1007/s00122-005-1997-5 | PMID: 15912345 ]
  • Fu Y, AP Hsia, L Guo, PS Schnable (2004) Types and frequencies of sequencing errors in methyl-filtered and high C0t maize genome survey sequences. Plant Physiol: 2040-2045.
    [ Abstract | Full Text PDF | Supplemental Materials | doi:10.1104/pp.104.041640 | PMID: 15299135 ]
  • Chou HH, AP Hsia, DL Mooney, PS Schnable (2004) Picky: oligo microarray design for large genomes. Bioinformatics: 2893-2902.
    [ Abstract | Full Text PDF | doi:10.1093/bioinformatics/bth347 | PMID: 15180932 | Cited 114 times ]
  • da Costa e Silva O, R Lorbiecke, P Garg, L Müller, M Waßmann, P Lauert, MJ Scanlon, AP Hsia, PS Schnable, K Krupinska, U Wienand (2004) The Etched1 gene of Zea mays (L.) encodes a zinc ribbon protein that belongs to the transcriptionally active chromosome (TAC) of plastids and is similar to the transcription factor TFIIS. Plant J: 923-939.
    [ Abstract | Full Text PDF | Supplemental Materials | doi:10.1111/j.1365-313X.2004.02094.x | PMID: 15165185 ]
  • Cui X, AP Hsia, F Liu, DA Ashlock, RP Wise, PS Schnable (2003) Alternative transcription initiation sites and polyadenylation sites are recruited during Mu suppression at the rf2a locus of maize. Genetics: 685-698.
  • Schnable PS, AP Hsia, BJ Nikolau (1998) Genetic recombination in plants. Curr Opin Plant Biol: 123-129.
    [ Abstract | Full Text PDF | doi:10.1016/S1369-5266(98)80013-7 | PMID: 10066571 | Cited 95 times ]
  • Hsia AP, PS Schnable (1996) DNA sequence analyses support the role of interrupted gap repair in the origin of internal deletions of the maize transposon, MuDR. Genetics: 603-618.
  • Xu X, AP Hsia, L Zhang, BJ Nikolau, PS Schnable (1995) Meiotic recombination break points resolve at high rates at the 5' end of a maize coding sequence. Plant Cell: 2151-2161.
    [ Abstract | Full Text PDF | doi:10.1105/tpc.7.12.2151 | PMID: 8718625 | Cited 70 times ]