Dr. An-Ping Hsia
(夏安平)

Consigliere/Assistant Scientist III

EDUCATION:

  • BVM, Veterinary Medicine, National Taiwan University, Taiwan, 1989
  • Ph.D., Interdepartmental Genetics, Iowa State University, 1995

EXPERIENCE:

  • Post-Doctoral Research Associate, Academia Sinica, 1995-1996
  • Lab Manager, Schnable Lab, 1996-2004
  • Consigliere/Assistant Scientist III, Schnable Lab, 2004-Present

E-mail:

PUBLICATIONS (13):

* Authors contributed equally to the article
  • Liu S, AP Hsia, PS Schnable (2013) Digestion-ligation-amplification (DLA): a simple genome walking method to amplify unknown sequences flanking mutator (Mu) transposons and thereby facilitate gene cloning. Methods Mol Biol, in press.
    [ Abstract | Full Text PDF | doi:10.1007/978-1-62703-568-2_12 | PMID: 23918428 ]
  • The International Brachypodium Initiative: Principal investigators: JP Vogel ; DF Garvin ; TC Mockler ; J Schmutz ; D Rokhsar ; MW Bevan ; DNA sequencing and assembly: K Barry ; S Lucas ; M Harmon-Smith ; K Lail ; H Tice ; J Schmutz ; J Grimwood ; N McKenzie ; MW Bevan ; Pseudomolecule assembly and BAC end sequencing: N Huo ; YQ Gu ; GR Lazo ; OD Anderson ; JP Vogel ; FM You ; MC Luo ; J Dvorak ; J Wright ; M Febrer ; MW Bevan ; D Idziak ; R Hasterok ; DF Garvin ; Transcriptome sequencing and analysis: E Lindquist ; M Wang ; SE Fox ; HD Priest ; SA Filichkin ; SA Givan ; DW Bryant ; JH Chang ; TC Mockler ; H Wu ; W Wu ; AP Hsia ; PS Schnable ; A Kalyanaraman ; WB Barbazuk ; TP Michael ; SP Hazen ; JN Bragg ; D Laudencia-Chingcuanco ; JP Vogel ; DF Garvin ; Y Weng ; N McKenzie ; MW Bevan ; Gene analysis and annotation: G Haberer ; M Spannagl ; K Mayer ; T Rattei ; T Mitros ; D Rokhsar ; SJ Lee ; JK Rose ; LA Mueller ; TL York ; Repeats analysis: T Wicker ; JP Buchmann ; J Tanskanen ; AH Schulman ; H Gundlach ; J Wright ; MW Bevan ; A Costa de Oliveira ; L da C. Maia ; W Belknap ; YQ Gu ; N Jiang ; J Lai ; L Zhu ; J Ma ; C Sun ; E Pritham ; Comparative genomics: J Salse ; F Murat ; M Abrouk ; G Haberer ; M Spannagl ; K Mayer ; R Bruggmann ; J Messing ; FM You ; MC Luo ; J Dvorak ; Small RNA analysis: N Fahlgren ; SE Fox ; CM Sullivan ; TC Mockler ; JC Carrington ; EJ Chapman ; GD May ; J Zhai ; M Ganssmann ; S Gurazada ; M German ; BC Meyers ; PJ Green ; Manual annotation and gene family analysis: JN Bragg ; L Tyler ; J Wu ; YQ Gu ; GR Lazo ; D Laudencia-Chingcuanco ; J Thomson ; JP Vogel ; SP Hazen ; S Chen ; HV Scheller ; J Harholt ; P Ulvskov ; SE Fox ; SA Filichkin ; N Fahlgren ; JA Kimbrel ; JH Chang ; CM Sullivan ; EJ Chapman ; JC Carrington ; TC Mockler ; LE Bartley ; P Cao ; KH Jung ; MK Sharma ; M Vega-Sanchez ; P Ronald ; CD Dardick ; S Bodt ; W Verelst ; D Inze ; M Heese ; A Schnittger ; X Yang ; UC Kalluri ; GA Tuskan ; Z Hua ; RD Vierstra ; DF Garvin ; Y Cui ; S Ouyang ; Q Sun ; Z Liu ; A Yilmaz ; E Grotewold ; R Sibout ; K Hematy ; G Mouille ; H Höfte ; TP Michael ; J Pelloux ; D O'Connor ; JC Schnable ; S Rowe ; F Harmon ; CL Cass ; JC Sedbrook ; ME Byrne ; S Walsh ; J Higgins ; MW Bevan ; P Li ; TP Brutnell ; T Unver ; H Budak ; H Belcram ; M Charles ; B Chalhoub ; I Baxter « show all participants » (2010) Genome sequencing and analysis of the model grass Brachypodium distachyon. Nature, in press.
  • Schnable PS*, D Ware*, RS Fulton, JC Stein, F Wei, S Pasternak, C Liang, J Zhang, LA Fulton, TA Graves, P Minx, AD Reily, L Courtney, SS Kruchowski, C Tomlinson, C Strong, K Delehaunty, C Fronick, W Courtney, SM Rock, E Belter, F Du, K Kim, RM Abbott, M Cotton, A Levy, P Marchetto, K Ochoa, SM Jackson, B Gillam, W Chen, L Yan, J Higginbotham, M Cardenas, J Waligorski, E Applebaum, L Phelps, J Falcone, K Kanchi, T Thane, A Scimone, N Thane, J Henke, T Wang, J Ruppert, N Shah, K Rotter, J Hodges, E Ingenthron, M Cordes, S Kohlberg, J Sgro, B Delgado, K Mead, A Chinwalla, S Leonard, K Crouse, K Collura, D Kudrna, J Currie, R He, A Angelova, S Rajasekar, T Mueller, R Lomeli, G Scara, A Ko, K Delaney, M Wissotski, G Lopez, D Campos, M Braidotti, E Ashley, W Golser, H Kim, S Lee, J Lin, Z Dujmic, W Kim, J Talag, A Zuccolo, C Fan, A Sebastian, M Kramer, L Spiegel, L Nascimento, T Zutavern, B Miller, C Ambroise, S Muller, W Spooner, A Narechania, L Ren, S Wei, S Kumari, BP Faga, MJ Levy, L McMahan, P Van Buren, MW Vaughn, K Ying, CT Yeh, SJ Emrich, Y Jia, A Kalyanaraman, AP Hsia, WB Barbazuk, RS Baucom, TP Brutnell, NC Carpita, C Chaparro, JM Chia, JM Deragon, JC Estill, Y Fu, JA Jeddeloh, Y Han, H Lee, P Li, DR Lisch, S Liu, Z Liu, DH Nagel, MC McCann, P San Miguel, AM Myers, D Nettleton, J Nguyen, BW Penning, L Ponnala, KL Schneider, DC Schwartz, A Sharma, C Soderlund, NM Springer, Q Sun, H Wang, M Waterman, R Westerman, TK Wolfgruber, L Yang, Y Yu, L Zhang, S Zhou, Q Zhu, JL Bennetzen, RK Dawe, J Jiang, N Jiang, GG Presting, SR Wessler, S Aluru, RA Martienssen, SW Clifton, WR McCombie, RA Wing, RK Wilson « view remaining 107 author(s) » (2009) The B73 maize genome: complexity, diversity, and dynamics. Science, in press.
  • Jung KH, CD Dardick, LE Bartley, P Cao, J Phetsom, P Canlas, YS Seo, M Shultz, S Ouyang, Q Yuan, BC Frank, E Ly, L Zheng, Y Jia, AP Hsia, K An, HH Chou, DM Rocke, GC Lee, PS Schnable, G An, CR Buell, PC Ronald (2008) Refinement of light-responsive transcript lists using rice oligonucleotide arrays: evaluation of gene-redundancy. PLoS One, in press.
    [ Abstract | Full Text PDF | Supplemental Materials | doi:10.1371/journal.pone.0003337 | PMID: 18836531 | Cited 105 times ]
  • Li J, AP Hsia, PS Schnable (2007) Recent advances in plant recombination. Curr Opin Plant Biol, in press.
    [ Abstract | Full Text PDF | doi:10.1016/j.pbi.2007.01.007 | PMID: 17291826 ]
  • Hsia AP, TJ Wen, HD Chen, Z Liu, MD Yandeau-Nelson, Y Wei, L Guo, PS Schnable (2005) Temperature gradient capillary electrophoresis (TGCE)--A tool for the high-throughput discovery and mapping of SNPs and IDPs. Theor Appl Genet, in press.
    [ Abstract | Full Text PDF | doi:10.1007/s00122-005-1997-5 | PMID: 15912345 ]
  • Fu Y, AP Hsia, L Guo, PS Schnable (2004) Types and frequencies of sequencing errors in methyl-filtered and high C0t maize genome survey sequences. Plant Physiol, in press.
    [ Abstract | Full Text PDF | Supplemental Materials | doi:10.1104/pp.104.041640 | PMID: 15299135 ]
  • Chou HH, AP Hsia, DL Mooney, PS Schnable (2004) Picky: oligo microarray design for large genomes. Bioinformatics, in press.
    [ Abstract | Full Text PDF | doi:10.1093/bioinformatics/bth347 | PMID: 15180932 | Cited 114 times ]
  • da Costa e Silva O, R Lorbiecke, P Garg, L Müller, M Waßmann, P Lauert, MJ Scanlon, AP Hsia, PS Schnable, K Krupinska, U Wienand (2004) The Etched1 gene of Zea mays (L.) encodes a zinc ribbon protein that belongs to the transcriptionally active chromosome (TAC) of plastids and is similar to the transcription factor TFIIS. Plant J, in press.
    [ Abstract | Full Text PDF | Supplemental Materials | doi:10.1111/j.1365-313X.2004.02094.x | PMID: 15165185 ]
  • Cui X, AP Hsia, F Liu, DA Ashlock, RP Wise, PS Schnable (2003) Alternative transcription initiation sites and polyadenylation sites are recruited during Mu suppression at the rf2a locus of maize. Genetics, in press.
  • Schnable PS, AP Hsia, BJ Nikolau (1998) Genetic recombination in plants. Curr Opin Plant Biol, in press.
    [ Abstract | Full Text PDF | doi:10.1016/S1369-5266(98)80013-7 | PMID: 10066571 | Cited 96 times ]
  • Hsia AP, PS Schnable (1996) DNA sequence analyses support the role of interrupted gap repair in the origin of internal deletions of the maize transposon, MuDR. Genetics, in press.
  • Xu X, AP Hsia, L Zhang, BJ Nikolau, PS Schnable (1995) Meiotic recombination break points resolve at high rates at the 5' end of a maize coding sequence. Plant Cell, in press.
    [ Abstract | Full Text PDF | doi:10.1105/tpc.7.12.2151 | PMID: 8718625 | Cited 70 times ]